Section 4 Simulation Construction

4 Simulation Construction

  4.1 Context

  4.2 Units

  4.3 General arrangement

  4.4 TUFLOW FV control file commands

    4.4.1 WQ Module activation

    4.4.2 Initial and boundary conditions

      4.4.2.1 Initial conditions

        4.4.2.1.1 Restart files

        4.4.2.1.2 Globally uniform

        4.4.2.1.3 Globally laterally uniform

        4.4.2.1.4 Globally vertically uniform

        4.4.2.1.5 Globally varying

      4.4.2.2 Boundary conditions

      4.4.2.3 Ordering

        4.4.2.3.1 Initial Conditions

        4.4.2.3.2 Boundary Conditions

  4.5 Water quality control file commands

    4.5.1 Part 1: Simulation controls

    4.5.2 Part 2: Constituent model settings

    4.5.3 Part 3: Material specifications

    4.5.4 Summary

    4.5.5 Log files

  4.6 Simulation Class: DO

    4.6.1 Prerequisites

    4.6.2 Part 1: Simulation specification

    4.6.3 Part 2: Constituent model specification

      4.6.3.1 Model class: Oxygen

        4.6.3.1.1 Constituent model: O2

      4.6.3.2 Model class: Pathogens (optional)

        4.6.3.2.1 Constituent model: Free

        4.6.3.2.2 Constituent model: Attached

    4.6.4 Part 3: Material specification

    4.6.5 Constituent ordering

      4.6.5.1 Pathogens (optional)

    4.6.6 Example

  4.7 Simulation Class: Inorganics

    4.7.1 Prerequisites

    4.7.2 Part 1: Simulation specification

    4.7.3 Part 2: Constituent model specification

      4.7.3.1 Model class: Oxygen

        4.7.3.1.1 Constituent model: O2

      4.7.3.2 Model class: Silicate

        4.7.3.2.1 Constituent model: Si

      4.7.3.3 Model class: Inorganic nitrogen

        4.7.3.3.1 Constituent model: AmmoniumNitrate

      4.7.3.4 Model class: Inorganic phosphorus

        4.7.3.4.1 Constituent model: FRPhs

        4.7.3.4.2 Constituent model: FRPhsads

      4.7.3.5 Model class: Phytoplankton

        4.7.3.5.1 Constituent model: Basic

        4.7.3.5.2 Constituent model: Advanced

      4.7.3.6 Model class: Pathogens (optional)

        4.7.3.6.1 Constituent model: Free

        4.7.3.6.2 Constituent model: Attached

    4.7.4 Part 3: Material specification

    4.7.5 Constituent ordering

      4.7.5.1 Excluding phytoplankton

        4.7.5.1.1 Phosphorus model FRPhs

        4.7.5.1.2 Phosphorus model FRPhsads

      4.7.5.2 Including phytoplankton

        4.7.5.2.1 Basic phytoplankton model

        4.7.5.2.2 Advanced phytoplankton model

      4.7.5.3 Including pathogens (optional)

    4.7.6 Example

  4.8 Simulation Class: Organics

    4.8.1 Prerequisites

    4.8.2 Part 1: Simulation specification

    4.8.3 Part 2: Constituent model specification

      4.8.3.1 Model class: Oxygen

        4.8.3.1.1 Constituent model: O2

      4.8.3.2 Model class: Silicate

        4.8.3.2.1 Constituent model: Si

      4.8.3.3 Model class: Inorganic nitrogen

        4.8.3.3.1 Constituent model: AmmoniumNitrate

      4.8.3.4 Model class: Inorganic phosphorus

        4.8.3.4.1 Constituent model: FRPhs

        4.8.3.4.2 Constituent model: FRPhsAds

      4.8.3.5 Model class: Organic matter

        4.8.3.5.1 Constituent model: Labile

        4.8.3.5.2 Constituent model: Refractory

      4.8.3.6 Model class: Phytoplankton

        4.8.3.6.1 Constituent model: Basic

        4.8.3.6.2 Constituent model: Advanced

      4.8.3.7 Model class: Pathogens (optional)

        4.8.3.7.1 Constituent model: Free

        4.8.3.7.2 Constituent model: Attached

    4.8.4 Part 3: Material specification

    4.8.5 Constituent ordering

      4.8.5.1 Labile

      4.8.5.2 Refractory

      4.8.5.3 Including pathogens (optional)

    4.8.6 Example

  4.9 Outputs

    4.9.1 WQ Module outputs

    4.9.2 TUFLOW FV outputs

    4.9.3 Units